Wetland ecosystem threat status

Freshwater (inland aquatic) realm

Nancy Job1 , Andrew Skowno1 , Jock Currie1 , Nacelle Collins2 , Adwoa Awuah1

1. South African National Biodiversity Institute

2. Free State Department of Economic, Small Business Development, Tourism and Environmental Affairs

Published

November 11, 2025

Inland wetlands remain highly threatened and under-protected. This places the vital services they provide and the incredible biodiversity they support at great risk.

Add landscape photo. Umgeni Vlei Provincial Nature Reserve and Ramsar site, KwaZulu-Natal (Ⓒ xxxx)

18%
of wetland extent
Critically Endangered
86%
of wetland extent
Threatened

Threatened wetland extent constitutes approximately 2.3 million ha of the more than 2.6 million hectares of inland wetlands mapped at the time of NBA 2025. Approximately 86% of inland wetland extent is Threatened, with 20% Critically Endangered, 21% Endangered, and 45% Vulnerable. The remaining 14% is Least Concern.

According to inland wetland ecosystem type, 72% of wetland types are Threatened, with 15 (18%) of inland wetland ecosystem types Critically Endangered, 20 (24%) Endangered, and 25 (30%) Vulnerable. The remaining 22 (27%) wetland types are Least Concern. Threatened wetland ecosystem types are spread widely across South Africa, while Critically Endangered and Endangered wetlands are clustered within the wheat belt / “mielie belt” agricultural lands of the central Free State extending into NorthWest Province, central Northern Cape, the Swartland agricultural lands of the Western Cape, the mining belt of Limpopo Province and the coastal regions of KwaZulu-Natal.

Figure 1. Ecosystem threat status for inland wetland ecosystem types. The inset graph shows percentage and number of ecosystem types per threat status category.

In terms of wetland hydrogeomorphic type, depression wetlands are the most threatened, with 24% of depression wetland types considered to be Threatened, 17% of both floodplain and unchannelled valley-bottom wetland types considered Threatened, and 15% of seep wetland types considered Threatened. Approximately 14% of depression wetland types and 19% of depression wetland extent considered to be Critically Endangered, while 2% of seep wetland types and 1% of unchannelled valley-bottom wetland types and no floodplain types are considered Critically Endangered.

Table 1. Ecosystem threat status and hydrogeomorphological (HGM) type for inland wetland ecosystem types.

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Figure 2. Inland wetland ecosystem threat status summarised by hydrogeomorphological (HGM) category, with (a) percentage of ecosystem types (labelled with their counts) in each threat status category, and (b) percentage wetland extent (km2) in each threat status category. ‘Valley-bottom’ represents the ‘Unchannelled valley-bottom’ HGM category.
Table 2. Threat status of inland wetland ecosystem types summarised by HGM category. Note that extent figures have been rounded.
Critically Endangered Endangered Vulnerable Least Concern
Depression Count 12 4 4 2
Extent (km2) 5 947 142 1 084 480
Seep Count 2 3 8 8
Extent (km2) 84 353 3 795 722
Unchannelled valley-bottom Count 1 8 5 6
Extent (km2) 58 1 310 906 1 308
Floodplain Count 0 7 7 5
Extent (km2) 0 4 340 7 717 1 660

Download the data here.

Note that the current wetland ecosystem threat status assessment is built on a robust interim wetland ecosystem typology. However, to ensure the most robust and defensible characterisation of wetland types, the National Wetland Map team is actively refining the typology into more detailed, validated subtypes in collaboration with specialist researchers and other national wetland map supporters. Ongoing work means the National Wetland Map is currently improving at a rapid rate and this may result in minor adjustments and an updated ecosystem threat assessment in the near future. For this reason, and as conditions on the ground may have changed since mapping, it is important for consistency that the national ecosystem threat status be referred to but also essential for the data to be verified in the field by a wetland professional and desirable that updates or discrepancies be reported back to the National Wetland Map team.

South Africa supports 22 primary catchments, named according to a letter of the alphabet e.g. A, X. The primary catchments are further grouped into six Water Management Areas (WMAs). These are the Vaal-Orange, Pongola-Umzimkhulu, Mzimvubu-Tsitsikamma, Limpopo-Olifants, Breede-Olifants, and Inkomati-Usuthu. Each WMA is managed by an established or in process Catchment Management Agency (CMA) which is responsible for overseeing the allocation, protection, and conservation of water resources within their respective areas.

To support the the consideration of biodiversity into emerging Catchment Management Strategies and implementation plans, the NBA headline indicators are presented in Table 1 according the 22 primary catchments, with an indication of which WMA each primary catchment falls within.

Figure 1.1. Ecosystem threat status of inland wetlands according to primary catchment and Water Management Area.

Knowing the spatial distribution of wetland ecosystem protection level per catchment as well as the distribution of highly threatened and under-protected wetland ecosystem types can xxx other measures such as xxx. These processes should take into consideration freshwater species ecosystem protection level and threat status, including Key Biodiversity Areas and ideally should be spatially located through a systematic conservation process such as those undertaken for Provincial Biodiversity Sector Plans and the National Freshwater Ecosystem Priority Areas.

Table 1.1. Ecosystem threat status of inland wetlands according to primary catchment and Water Management Area.

Acknowledgements

References

Note that wetlands are still being mapped and validated within Provincial Nature Reserves around the country.

Figure 2.1. Ecosystem threat status of inland wetlands across the provinces of South Africa.

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Table 2.1. Ecosystem threat status of inland wetlands across the provinces of South Africa.

Acknowledgements

References

6-103.

Text Note that wetlands are still being mapped and validated within National Parks around the country.

MZNP etc for rivers and wetlands it is essential to validate and feedback eg many wetlands are missed, rivers are mis-classified and condition needs to be validated.

New grasslands park xxx additional wetlands.

Figure 3.1. National Parks of South Africa

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Table 3.1 Ecosystem threat status of inland wetlands across National Parks.

Acknowledgements

References

Roux et al, 2006. Mainstreaming freshwater biodiversity.

Approach to assess this indicator

Ecosystem threat status is a headline indicator established for assessing how close ecosystem types are to collapsing or losing vital aspects of their structure, function, or composition.

Each of the 82 inland wetland ecosystem types were placed into one of four categories: Critically Endangered (CR), Endangered (EN), Vulnerable (VU) and Least Concern (LC); where CR, EN and VU together make up the threatened categories. The categories are based on assessments of quantitative and qualitative criteria (and thresholds) linked to ecosystem extent, ecological condition and threatening processes. Read more here: chl_rle_explained.qmd // [For consistency with NBA 2018, the NBA 2025 ETS assessment follows the methods developed by Nel et al. (2007) and modified by van Deventer et al. (2019).] The approach uses the proportion of each ecosystem type that is in a good to fair condition (PES class A B and C) and a set of thresholds. If less than 20% of a type (measured by length of river segment) is in a A or B condition then the type is categorised as Critically Endangered; if between 20-35% of the type is in A or B condition then the type is categorised as Endangered; if less than 60% of the type is in A or or C condition then the type is categorised as Vulnerable; if none of these thresholds are crossed then the type is Least Concern. This method aligns with the South African Framework for Threatened ecosystems but not the IUCN RLE 1.1. Processes to transition to the IUCN framework are underway - but in the interest of comparing past results, the 2011 methods have been implemented.

Technical documentation

Code repository: https://github.com/askowno/RLE_wetl

Key publications:

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References

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